Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAAAGACAGCAGTGGCTGCGGA
((((((((((.(((((..(((&)))....))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017016312
GeneSymbolPLCE1
Binding site2194,2218
Score0.923
Seed1
Au0.5
Energy-22.2
Binding len24
Me-6.762
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure