Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCACCACTGTGAGGCCTACAGCTCTGCCGGGG
.(((((((.....(((((....&.)))))....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006835
GeneSymbolCCNI
Binding site456,489
Score1.0
Seed1
Au0.338
Energy-18.9
Binding len18
Me-13.553
Phylopstem0.04268644285714286
Phylopflank0.34497863124999983
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure