Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGAGGGTGCCTGCGCAGCTGCGAC
(((((((((((...(((....&.)))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001333
GeneSymbolCTSV
Binding site38,64
Score0.846
Seed1
Au0.456
Energy-22.4
Binding len19
Me-9.43
Phylopstem-0.15987065454545452
Phylopflank0.02808688785714289
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure