Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTCTGGTAACAGAATGCCAGGA
.((((((((......(((((((&)))))))........)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006858
GeneSymbolTMED1
Binding site1083,1107
Score0.846
Seed1
Au0.368
Energy-17.4
Binding len24
Me-14.089
Phylopstem4.5529742625
Phylopflank3.897892143749999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure