Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTAGCCTGCTGCTGCTGCT
..(((((.(((((..((((((&))))))....))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017016498
GeneSymbolHPSE2
Binding site1553,1575
Score0.923
Seed0
Au0.529
Energy-23.4
Binding len22
Me-8.863
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings16
Pairings in 3prime end6
Position3UTR
2D Structure