Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTGCATTGTTCTAGAGTGAAACAGGTGTCAGGC
.(((((((((((((((((((..&)))))))))))...............)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006888
GeneSymbolCALM1
Binding site1275,1310
Score0.923
Seed1
Au0.603
Energy-23.0
Binding len35
Me-3.793
Phylopstem1.6847233500000003
Phylopflank1.4410384551249997
Longest consecutive pairings11
Position of longest consecutive pairings24
Pairings in 3prime end6
Position3UTR
2D Structure