Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGAGGGTTCAGTGTTG
.(((.(((.((((((((((..&))))))))))))).))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_006897
GeneSymbolHOXC9
Binding site981,999
Score1.0
Seed0
Au0.618
Energy-21.8
Binding len18
Me-8.969
Phylopstem1.23751438
Phylopflank1.5043491525000001
Longest consecutive pairings13
Position of longest consecutive pairings5
Pairings in 3prime end6
Position3UTR
2D Structure