Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTGCGTGTTCACACTATCATATTTTGTATGCCCTGGA
.((.((((((((((((((((..&))))))))..................))))))))..)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006920
GeneSymbolSCN1A
Binding site11047,11086
Score0.846
Seed0
Au0.662
Energy-19.6
Binding len39
Me-6.825
Phylopstem3.0718774558823534
Phylopflank3.6150580312500007
Longest consecutive pairings8
Position of longest consecutive pairings31
Pairings in 3prime end6
Position3UTR
2D Structure