Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACAGAGACTTGCCAGGA
.(((((((.....(((((....&)))))......))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006933
GeneSymbolSLC5A3
Binding site6397,6416
Score0.923
Seed1
Au0.662
Energy-19.1
Binding len19
Me-13.553
Phylopstem0.10083454285714286
Phylopflank0.04982323375000001
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure