Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATCCACCTTGTGTGCCT
....(((((((((.((.((((.&)))).)).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006939
GeneSymbolSOS2
Binding site3055,3073
Score0.923
Seed0
Au0.721
Energy-17.3
Binding len18
Me-10.403
Phylopstem4.01067
Phylopflank5.277623575
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure