Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGAGGGAAGCTGCCAGGC
....(((((((.((((((.((&)).)))))))))).))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_006940
GeneSymbolSOX5
Binding site1128,1146
Score0.846
Seed0
Au0.412
Energy-21.9
Binding len18
Me-12.893
Phylopstem0.3610304875
Phylopflank0.5910905925000001
Longest consecutive pairings10
Position of longest consecutive pairings5
Pairings in 3prime end7
PositionCDS
2D Structure