Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGTCCACAGTGGCCAGGTG
(((((((.(((..(((.((((.&)))).))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006943
GeneSymbolSOX12
Binding site3461,3480
Score0.846
Seed1
Au0.485
Energy-17.8
Binding len19
Me-10.887
Phylopstem1.2051673142857144
Phylopflank0.24415411124999997
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure