Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGGCGCCGCAATGGACGTGCGGGCGCTGCCGTGGCTGCC
..(((((((((((.((.....&.)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001334
GeneSymbolCTSO
Binding site6,48
Score0.846
Seed1
Au0.221
Energy-21.9
Binding len16
Me-5.814
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure