Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTCACACGGAGATGCCAGGG
.((((((((.(..(((((((..&)))).)))..)..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006946
GeneSymbolSPTBN2
Binding site4173,4195
Score0.923
Seed1
Au0.471
Energy-19.5
Binding len22
Me-9.672
Phylopstem-0.31444586249999995
Phylopflank0.2847013
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure