Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACAAAAATTAGCCAGGTG
(((((((......((((((...&)))))).......))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006946
GeneSymbolSPTBN2
Binding site10693,10714
Score0.846
Seed1
Au0.529
Energy-18.6
Binding len21
Me-16.011
Phylopstem0.15336268571428566
Phylopflank0.20377296875
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure