Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTGCTTTGTATTTAAAAACAAGAACAGCCAAGGGTTGTTCGCCAGGG
.((((((..(((((.(......&.).)))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006981
GeneSymbolNR4A3
Binding site2947,2994
Score0.846
Seed1
Au0.574
Energy-18.0
Binding len17
Me-7.899
Phylopstem2.3938466666666667
Phylopflank2.145175675
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end1
Position3UTR
2D Structure