Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGAAGAGCCAGAGGAGTCAGTA
.(((((((((..(((((.(...&.).)))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001335
GeneSymbolCTSW
Binding site378,402
Score1.0
Seed1
Au0.456
Energy-23.0
Binding len18
Me-9.965
Phylopstem-0.7833699566666665
Phylopflank-0.263092781875
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure