Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAAGCCTCACAGTTGTATGTGAGGG
.(((.(((((((((((.((...&.))))).)))))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_007017
GeneSymbolSOX30
Binding site2415,2440
Score0.923
Seed0
Au0.588
Energy-18.4
Binding len20
Me-7.912
Phylopstem1.1773185000000002
Phylopflank1.03289123625
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end4
Position3UTR
2D Structure