Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGGCTCCCTGTGTTTCCCAGGCTGCAGTGCAGTGGCCAGTCACAAGGTTG
.(((((((((((((((((...&))))...............)))))))))..................)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_007018
GeneSymbolCNTRL
Binding site118,169
Score0.821
Seed1
Au0.456
Energy-21.2
Binding len51
Me-3.793
Phylopstem-0.002827599999999992
Phylopflank-0.07140588787499996
Longest consecutive pairings9
Position of longest consecutive pairings23
Pairings in 3prime end5
Position5UTR
2D Structure