Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCATTGTGTGGCT
....(.((((((((((......&)))))))))).).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_007034
GeneSymbolDNAJB4
Binding site952,965
Score1.0
Seed0
Au0.603
Energy-15.0
Binding len13
Me-11.448
Phylopstem5.1899143
Phylopflank4.1665236425000005
Longest consecutive pairings10
Position of longest consecutive pairings3
Pairings in 3prime end2
PositionCDS
2D Structure