Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTCCGTTGTTGGTCCACTGCAGTGCTGGGG
.((((((((....(((((....&.))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_007039
GeneSymbolPTPN21
Binding site3863,3893
Score0.846
Seed1
Au0.397
Energy-15.8
Binding len15
Me-12.497
Phylopstem1.0995462500000002
Phylopflank1.7234870187500002
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure