Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGATGGCGAGCAGGGG
...((((((.(((.(((((..&))))).)))..)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_007039
GeneSymbolPTPN21
Binding site5146,5164
Score0.846
Seed0
Au0.412
Energy-27.6
Binding len18
Me-8.614
Phylopstem5.040543333333333
Phylopflank3.726897535
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure