Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGAAAAACTGCAACTGCTGCTGGGC
.(.((((.(((((((((....&.))))))))).)))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001335
GeneSymbolCTSW
Binding site454,482
Score0.923
Seed0
Au0.426
Energy-20.8
Binding len18
Me-7.664
Phylopstem0.7176800555555555
Phylopflank0.721316108375
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end4
PositionCDS
2D Structure