Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAACCAACATTTGCTAAGTCTCTACTGTATGCCAGGG
.(((((((((((..(((((...&.)))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_007050
GeneSymbolPTPRT
Binding site5789,5826
Score1.0
Seed1
Au0.544
Energy-25.5
Binding len18
Me-5.939
Phylopstem0.04196472727272728
Phylopflank0.69000774275
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure