Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTATGATGTGGCCGGGA
.((((((.((((.((((.(...&).)))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_007069
GeneSymbolPLAAT3
Binding site616,634
Score0.846
Seed1
Au0.529
Energy-15.4
Binding len18
Me-7.396
Phylopstem4.89740025
Phylopflank1.9562077212499998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure