Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGGGGGCTGTGCTAGGG
.(((((((((...(.(((....&))).)...))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_007075
GeneSymbolWDR45
Binding site1587,1605
Score0.846
Seed1
Au0.441
Energy-16.4
Binding len18
Me-11.989
Phylopstem0.24832511111111108
Phylopflank0.0647538125
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure