Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGTCTGGTGGGCTGCCAGGTG
((((((((..(....((((((.&))))))...)..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_007098
GeneSymbolCLTCL1
Binding site516,537
Score0.846
Seed1
Au0.515
Energy-19.6
Binding len21
Me-12.465
Phylopstem0.6689217062499999
Phylopflank0.58495425
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure