Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTAGCAGGGTGGTCAGGG
.((((((.(((..(((......&.)))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_007107
GeneSymbolSSR3
Binding site643,663
Score0.846
Seed1
Au0.544
Energy-15.8
Binding len16
Me-10.743
Phylopstem0.9221221000000001
Phylopflank0.48183045024999993
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure