Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTAAGGGCAGAGTTGGATACCCCATTGTGAAGCCAGGG
.((((((.(((((((.......&.)))))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_007115
GeneSymbolTNFAIP6
Binding site337,375
Score0.923
Seed1
Au0.485
Energy-19.1
Binding len17
Me-6.34
Phylopstem4.161931142857143
Phylopflank4.9278875375
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end1
PositionCDS
2D Structure