Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAGTGCGGCTGCAGTTGCAGG
(((((((((((((((((.((.&))..))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017017220
GeneSymbolCPT1A
Binding site62,84
Score0.923
Seed1
Au0.309
Energy-27.4
Binding len22
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure