Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTACAACCGCTCAGAGGCATGTCCAGCTGCT
..((((((((((((((.((((&))))))))))))..............)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330448
GeneSymbolCD164L2
Binding site394,427
Score1.0
Seed1
Au0.426
Energy-22.9
Binding len33
Me-4.957
Phylopstem2.9951705357142844
Phylopflank2.3249031575000005
Longest consecutive pairings12
Position of longest consecutive pairings21
Pairings in 3prime end7
PositionCDS
2D Structure