Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTCTGCAGCGGTGCCT
....(((((....(((((((((&)))))))))...))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_007177
GeneSymbolFAM107A
Binding site1298,1316
Score0.846
Seed0
Au0.515
Energy-17.5
Binding len18
Me-18.25
Phylopstem0.6069306666666665
Phylopflank-0.2336482945
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end8
Position3UTR
2D Structure