Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTA
.(((((.((((((((((((((.&)))))).......))))))))..................))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001337
GeneSymbolCX3CR1
Binding site2136,2181
Score0.846
Seed0
Au0.544
Energy-21.0
Binding len45
Me-5.337
Phylopstem4.479857047619048
Phylopflank1.37817668125
Longest consecutive pairings8
Position of longest consecutive pairings24
Pairings in 3prime end7
Position3UTR
2D Structure