Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTTTCCCCAAACTCTTACATCTTAGTGAGCATTGTGTGCTG
....((((((((((((..(((.&.)))..)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_007216
GeneSymbolHPS5
Binding site956,999
Score0.846
Seed0
Au0.632
Energy-18.2
Binding len19
Me-9.547
Phylopstem0.12103135308333333
Phylopflank0.16728513368749998
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure