Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTGCATGTATGCCCTAGGA
.((((((((((.(((((((...&))))))))))))))..))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_007220
GeneSymbolCA5B
Binding site4106,4126
Score0.923
Seed1
Au0.603
Energy-19.5
Binding len20
Me-7.14
Phylopstem-0.06051531666666669
Phylopflank0.2487135687500001
Longest consecutive pairings14
Position of longest consecutive pairings6
Pairings in 3prime end5
Position3UTR
2D Structure