Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTGGAAGAGCCTGCAGGTGCTGCTGCGT
.((((((.(((.((((.((((&.)))))))).))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001337
GeneSymbolCX3CR1
Binding site2376,2406
Score0.846
Seed1
Au0.412
Energy-23.6
Binding len21
Me-9.454
Phylopstem2.1725941666666664
Phylopflank1.17941603625
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end7
Position3UTR
2D Structure