Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTAGTGATTGCCAGGTC
((((((((((((..........&)))).....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_007241
GeneSymbolSNF8
Binding site1494,1512
Score0.865
Seed1
Au0.471
Energy-14.9
Binding len18
Me-7.052
Phylopstem5.185359235294118
Phylopflank4.54311731375
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure