Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATTATGGCTTCACAAATATGTGCTCTATATTGTCTGCCAGGTC
((((((((.((((((((((...&.)))))))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_007249
GeneSymbolKLF12
Binding site3440,3485
Score1.0
Seed1
Au0.603
Energy-26.9
Binding len21
Me-4.994
Phylopstem0.14226336000000003
Phylopflank0.39298776375000005
Longest consecutive pairings10
Position of longest consecutive pairings10
Pairings in 3prime end5
Position3UTR
2D Structure