Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTAATTGTATTTTTAGTACAGATGGGGTTTTGCTATGTTGGCCAGGC
.((((((..(((..(((((...&.)))))..)))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_007253
GeneSymbolCYP4F8
Binding site2301,2348
Score0.923
Seed1
Au0.529
Energy-19.2
Binding len20
Me-9.309
Phylopstem-0.3969548333333333
Phylopflank0.06486548750000003
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure