Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACCAGCTGCC
..(((((((.....((((((.&))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017017539
GeneSymbolNPAS4
Binding site1100,1114
Score0.846
Seed1
Au0.441
Energy-18.3
Binding len14
Me-14.517
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure