Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGCCCAGGGCCGCTGGGAGGCCGCTGAGGGCCTGCTGCAGGA
....(((((((((((((((..&.))))))).............)))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_007263
GeneSymbolCOPE
Binding site719,761
Score0.846
Seed0
Au0.309
Energy-24.7
Binding len30
Me-9.547
Phylopstem4.6724924
Phylopflank3.5511160700000004
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure