Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTGCTGTTTGCCAT
...(((((.(((..((((((((&))))))))))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_007348
GeneSymbolATF6
Binding site5409,5427
Score0.846
Seed0
Au0.603
Energy-17.0
Binding len18
Me-9.717
Phylopstem-0.3260465
Phylopflank0.12565263875
Longest consecutive pairings11
Position of longest consecutive pairings7
Pairings in 3prime end8
Position3UTR
2D Structure