Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTCTTGCTCTGTTGCCAGGC
.(((((((.(((..((((((((&)))))).))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_007366
GeneSymbolPLA2R1
Binding site6883,6905
Score0.846
Seed1
Au0.529
Energy-20.7
Binding len22
Me-6.996
Phylopstem0.2846246555555555
Phylopflank0.13615375374999997
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure