Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTGCGCGCGAACTGTAAGTGCCAGGG
.(((((((((((..........&.)))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_007370
GeneSymbolRFC5
Binding site10,37
Score0.846
Seed1
Au0.394
Energy-16.2
Binding len15
Me-6.908
Phylopstem2.1135131538461533
Phylopflank1.1205435297499995
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
Position5UTR
2D Structure