Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTATAAATTGACTTCTTTTTCTTAGTTGTATGGCCAGGC
.(((((((((((((..(((...&.)))..)))))))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_007372
GeneSymbolDDX42
Binding site3447,3488
Score1.0
Seed1
Au0.588
Energy-22.7
Binding len21
Me-4.762
Phylopstem0.11896532857142858
Phylopflank1.0134160374999999
Longest consecutive pairings8
Position of longest consecutive pairings7
Pairings in 3prime end3
Position3UTR
2D Structure