Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTTTGCCCTCCTATGAGTGAGAGGGAGGGCCTCAGTCTTCCGCCCCCAGCCCACTCTCATGGTCC
.(((((((..((((((((...&.))))))))..))).........................)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_012080
GeneSymbolPUDP
Binding site706,772
Score0.846
Seed1
Au0.382
Energy-21.9
Binding len44
Me-6.092
Phylopstem-0.2913344625
Phylopflank-0.12105985875
Longest consecutive pairings8
Position of longest consecutive pairings35
Pairings in 3prime end5
PositionCDS
2D Structure