Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTAGAGAAGCACTGGAAGAGCGTTGTGAGCCAGT
..(((((.((((((((......&.)))))))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_012095
GeneSymbolAP3M1
Binding site121,156
Score0.923
Seed0
Au0.588
Energy-19.2
Binding len16
Me-7.271
Phylopstem-0.19360275000000005
Phylopflank0.18106882725000012
Longest consecutive pairings8
Position of longest consecutive pairings7
Pairings in 3prime end2
PositionCDS
2D Structure