Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTACTGCACTTGATGCCAGT
..(((((((.((((((((....&.))))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_012096
GeneSymbolAPPL1
Binding site2893,2913
Score0.846
Seed1
Au0.603
Energy-18.7
Binding len18
Me-6.2
Phylopstem-0.3975022222222222
Phylopflank0.589848115
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure