Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTACCATGTTTGCCAGGA
.(((((((.(((..(((((...&)))))..))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_012117
GeneSymbolCBX5
Binding site4474,4493
Score0.846
Seed1
Au0.559
Energy-19.5
Binding len19
Me-6.996
Phylopstem-0.3469775
Phylopflank-0.04958332250000004
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure