Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCATGCGTCTTAGTGTAGGCCGGGTC
(((((((.((((....((((..&.))))...)))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_012125
GeneSymbolCHRM5
Binding site4219,4245
Score0.846
Seed1
Au0.529
Energy-18.9
Binding len21
Me-9.366
Phylopstem0.24779574285714287
Phylopflank0.03295241999999999
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure